Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916416.1_cds_XP_016466127.1_59013
CDS Infomation

[gene=LOC107788905] [db_xref=GeneID:107788905] [protein=4-coumarate--CoA ligase-like 5] [protein_id=XP_016466127.1] [location=complement(join(49769..49882,49981..50083,50205..50272,50405..50550,53110..54349))] [gbkey=CDS]
Sequence

ATGGCACAGTTTAGCAATGGCTCAACCGTCGATCCAAGAACCGGCTATTCTCCGGTGAAC
TCAACATTCTACAGCAAACGAGACCCAATTCCCTTGCCAGCAAACGATGCTCTCGACGTC
ACAACTTTCATATCATCACGCGCGCACCGCGGCAAGATCGCTTACATCGACGCCACAACA
GGGCAACGTCTCACTTTCTCCGACGTCTGGAACGCCGTCGAATCTTTAGCCACGTGTCTC
TCTATCGACATGGGAATTCGTAAGGGCAACGTAGTTCTTCTCCTCTCTCCAAACTCCATC
TATTTCCCCATCGTTTGCCTCGCCGTCATGTCTCTCGGCGCTATTATCACCACAACAAAC
CCCCTCAACACCCCACGTGAAATTAACAAACAGATCAAAGATTCAAACCCTGTAATCTCT
TTCACAATCCCTGAACTCCTCCCTAAGCTCGTCGACTCTAATCTCCCGATTATTCTCATC
AACAGTCAAACAACAAATCTTACTCAAAAGGGTAATTTTAATTTCAAGATTGTGGGTAAT
TTAGAGAATTTGATTCAGAAAAAACCTGTTCAAAGCAGATTGAAAGAGCGAGTGACACAA
GATGATACAGCTACTCTGCTTTATTCTTCAGGAACTACTGGTGCAAGTAAAGGAGTTGTT
TCATCTCATAGAAATTTAATTGCTATGGTTCAAACAATAGTGGGTCGGTTCAAATTAGAC
GAAGGAGAACAAACTTTTATTTGTACAGTTCCCATGTTTCATATTTACGGCTTAGCAGCT
TTTGCAGCAGGGTTATTAGCTAGTGGATCGACAATTGTGGTACTATCGAAATTCGAAATG
GACGAAATGCTATTATCTATTCACAAATACAAAGCAACTTATTTACCACTCGTGCCGCCG
ATTCTTGTTGCGCTAGTGAATAATGCTGAGGTGATTAAAAAGAAATATGATTTGAGCAGT
TTGAAGAAAGTTCTTTCTGGGGGTGCACCTTTGAGTAAGGAAGTAACTGAAGGGTTTTTG
GAGAAATATCCAAGTGTGGCAATTTTGCAAGGGTATGGGTTGACTGAGTCAACGGGAATT
GGGGCGTCGACGGATTCGTTAGAAGAGAGCCGGAGATATGGGACGGCGGGGATGTTGTCG
CCGAGCATGTCGGCAAAAATTGTGGATCCGGAAAGTGGGAAGGCGTTGCCGGTGAATAAG
ACCGGCGAACTTTGGCTAAGGGGACCTACCATTATGAAAGGTTATTTCAGTAATGAAGAA
GCTACTGCCTCAACTCTAGACTCAGAGGGATGGTTAAGAACTGGAGATCTTTGCTATATA
GATGAGGACGGTTTCATTTTTGTGGTTGATAGATTGAAGGAGCTGATCAAATATAAGGGT
TATCAGGTTCCTCCAGCAGAGTTAGAGGCTTTGTTGCTCAATCATCCACAGATTTCTGAT
GCTGCTGTTATACCGTTCCCGGATAAGGATGTCGGACAGTTTCCTATGGCATATGTAGTA
AGAAAATCTGGAAGTACTATGTCAGAGAGCGCAGTCATGGATTTTATTGCCAAACAGGTG
GCTCCATACAAGAGAATCAGGAGAGTTGCATTTGTGGCTTCCATACCCAAGAATCCTTCT
GGCAAAATTCTTAGGAAGGATCTGATAAAGCTAGCAACATCTAAACTCTGA

Peptide Sequence

PEP ID

XP_016466127.1
PEP Infomation

PREDICTED: 4-coumarate--CoA ligase-like 5 [Nicotiana tabacum]
Sequence

MAQFSNGSTVDPRTGYSPVNSTFYSKRDPIPLPANDALDVTTFISSRAHRGKIAYIDATT
GQRLTFSDVWNAVESLATCLSIDMGIRKGNVVLLLSPNSIYFPIVCLAVMSLGAIITTTN
PLNTPREINKQIKDSNPVISFTIPELLPKLVDSNLPIILINSQTTNLTQKGNFNFKIVGN
LENLIQKKPVQSRLKERVTQDDTATLLYSSGTTGASKGVVSSHRNLIAMVQTIVGRFKLD
EGEQTFICTVPMFHIYGLAAFAAGLLASGSTIVVLSKFEMDEMLLSIHKYKATYLPLVPP
ILVALVNNAEVIKKKYDLSSLKKVLSGGAPLSKEVTEGFLEKYPSVAILQGYGLTESTGI
GASTDSLEESRRYGTAGMLSPSMSAKIVDPESGKALPVNKTGELWLRGPTIMKGYFSNEE
ATASTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVPPAELEALLLNHPQISD
AAVIPFPDKDVGQFPMAYVVRKSGSTMSESAVMDFIAKQVAPYKRIRRVAFVASIPKNPS
GKILRKDLIKLATSKL

Transcript Sequence

Gene sequence data has not been registered.